STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37150.1Sterol desaturase. (261 aa)    
Predicted Functional Partners:
EEX37151.1
Putative cytoplasmic protein.
       0.734
EEX36348.1
Dihydrolipoamide dehydrogenase.
 
   
 0.698
rpsS
SSU ribosomal protein S19p (S15e); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
   0.674
nagK
ROK family protein; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.
       0.645
EEX38428.1
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.
   
 0.634
EEX38429.1
2-octaprenyl-6-methoxyphenol hydroxylase.
   
 0.634
EEX37602.1
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.
   
 0.634
EEX36343.1
FAD monooxygenase PheA/TfdB family.
   
 0.634
EEX36103.1
Flavodoxin reductases, family 1.
  
 
 0.625
EEX36824.1
NADH oxidoreductase Hcr.
  
 
 0.604
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.