STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX37168.1Formate dehydrogenase-O iron-sulfur subunit; Most likely function alternative not yet resolved; putative formate dehydrogenase iron-sulfur subunit. (202 aa)    
Predicted Functional Partners:
EEX37167.1
Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
EEX37169.1
Formate dehydrogenase -O gamma subunit.
 
 0.999
EEX37164.1
Iron-sulfur cluster-binding protein.
 
 
 0.975
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.949
EEX37906.1
Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.936
EEX37165.1
Putative formate dehydrogenase-specific chaperone.
 
  
 0.935
EEX35927.1
Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.935
fdhD
Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
  
 0.910
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
     
 0.880
EEX36844.1
Pyruvate formate-lyase.
    
 0.872
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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