Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37182.1Hypothetical protein. (394 aa)    
Predicted Functional Partners:
EEX37183.1
Signal transduction histidine kinase.
  
 
  0.826
EEX37594.1
Outer membrane porin protein.
 
    0.583
EEX36456.1
MoxR-like ATPase.
  
     0.569
EEX37824.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.540
EEX36386.1
Outer membrane protein.
 
    0.527
EEX38317.1
Outer membrane protein OmpU.
 
    0.524
EEX38628.1
O-methyltransferase-related protein.
  
     0.508
EEX35658.1
Multi-sensor hybrid histidine kinase.
  
  
 0.508
EEX36873.1
Hypothetical protein; Belongs to the UPF0149 family.
  
     0.496
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
  
    0.487
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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