STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37195.1Tail-specific protease precursor. (665 aa)    
Predicted Functional Partners:
EEX38302.1
Lipoprotein NlpI; May be involved in cell division.
  
 
 
 0.898
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.888
proQ
ProQ protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
 
  
 0.884
EEX35829.1
Serine/threonine protein kinase.
  
 
 0.786
EEX37984.1
MSHA biogenesis protein MshQ.
  
 
 0.733
EEX35830.1
Chromosome segregation ATPase.
  
 
 0.733
EEX36307.1
BatD.
  
 
 0.731
EEX37194.1
Hypothetical protein.
       0.723
EEX35609.1
Membrane-bound metallopeptidase.
  
  
 0.669
EEX37197.1
Free methionine-(R)-sulfoxide reductase fRMsr.
     
 0.664
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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