STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37216.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.787
EEX35609.1
Membrane-bound metallopeptidase.
   
 
 0.775
EEX37131.1
Methyl-accepting chemotaxis sensory transducer.
    
 0.745
EEX37310.1
GGDEF family protein.
     
 0.734
EEX35659.1
Signal transduction histidine kinase.
    
 0.730
EEX37217.1
Hypothetical cytosolic protein.
 
    
0.604
EEX36021.1
Predicted signal transduction protein.
    
 0.521
EEX37312.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
    
  0.456
EEX37546.1
Methyl-accepting chemotaxis sensory transducer.
    
  0.456
EEX36039.1
Methyl-accepting chemotaxis protein.
    
  0.456
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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