Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37226.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
EEX37225.1
Hypothetical protein.
       0.795
EEX36541.1
Hypothetical protein.
  
     0.772
EEX38594.1
Hypothetical protein.
  
     0.730
EEX38161.1
Sodium-type polar flagellar protein MotX.
  
     0.632
EEX37523.1
ATPase involved in DNA repair.
  
     0.632
EEX38044.1
General secretion pathway protein M.
  
     0.567
nqrA
Na(+)-translocating NADH-quinone reductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
 
     0.527
EEX37384.1
Hypothetical protein.
  
     0.523
EEX38025.1
Hypothetical protein.
  
     0.521
EEX38045.1
General secretion pathway protein N.
  
     0.510
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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