STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37233.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
EEX37234.1
ribosomal-protein-S5p-alanine acetyltransferase.
       0.696
EEX37647.1
Hypothetical protein.
  
     0.686
EEX37235.1
Transcriptional repressor protein TyrR.
       0.683
EEX35997.1
Hypothetical protein.
  
     0.660
EEX37236.1
DUF697 domain-containing protein.
       0.620
EEX37237.1
Putative ATP-binding protein.
       0.620
EEX37450.1
Hypothetical protein.
  
     0.599
EEX37139.1
tPR domain protein putative component of TonB system.
  
     0.570
EEX37501.1
Hypothetical protein.
  
     0.566
EEX37987.1
MSHA pilin protein MshC.
  
     0.561
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.