STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37235.1Transcriptional repressor protein TyrR. (514 aa)    
Predicted Functional Partners:
EEX37234.1
ribosomal-protein-S5p-alanine acetyltransferase.
       0.817
EEX37236.1
DUF697 domain-containing protein.
     
 0.774
EEX38226.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
   
 0.773
EEX37551.1
Regulatory protein LuxO.
  
     0.744
EEX37237.1
Putative ATP-binding protein.
  
  
 0.729
EEX37233.1
Hypothetical protein.
       0.683
EEX38265.1
Chorismate mutase I/cyclohexadienyl dehydrogenase.
      
 0.548
EEX38259.1
Chorismate mutase I/prephenate dehydratase.
      
 0.547
EEX37240.1
Para-aminobenzoate synthase aminase component.
     
 0.457
EEX37119.1
Homogentisate 1,2-dioxygenase.
     
 0.437
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.