STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37293.1Ferric iron ABC transporter iron-binding protein. (339 aa)    
Predicted Functional Partners:
EEX37295.1
ABC transporter, permease protein.
 
 
 0.997
EEX37294.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
  0.981
EEX35737.1
ABC transporter, permease protein.
 
 
 0.950
EEX36882.1
Ferric iron ABC transporter permease protein.
 
 
 0.906
EEX38336.1
Ferric iron ABC transporter permease protein.
 
 
 0.888
EEX38335.1
Ferric iron ABC transporter iron-binding protein.
  
  
 0.791
EEX36880.1
Ferric iron ABC transporter ATP-binding protein.
  
 
 0.749
fbpC
ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 
 0.701
potA
Spermidine putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.661
EEX38217.1
Thiamin ABC transporter transmembrane component.
 
 
 0.617
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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