STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37314.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
EEX35956.1
MutT/nudix family protein.
 
  
  0.825
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
    
 0.795
EEX37312.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
    
  0.789
EEX37139.1
tPR domain protein putative component of TonB system.
  
  
  0.783
EEX37203.1
Hypothetical protein.
  
     0.770
EEX36746.1
Metal-dependent phosphohydrolase.
   
 
  0.761
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
    
  0.759
EEX35659.1
Signal transduction histidine kinase.
    
  0.756
EEX37038.1
Hypothetical protein.
  
     0.740
EEX37630.1
Zn-ribbon-containing, possibly nucleic-acid-binding protein.
  
     0.740
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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