STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37342.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
EEX38571.1
Transposition protein TnsD-related protein.
  
     0.760
EEX38614.1
Hypothetical protein.
  
     0.709
EEX36001.1
Hypothetical protein.
  
     0.631
EEX37341.1
Hypothetical protein.
 
     0.608
EEX36845.1
Hypothetical protein.
  
     0.602
EEX38570.1
Tn7-like transposition protein C.
 
     0.596
EEX37575.1
AAA ATPase.
  
     0.574
EEX38475.1
TnpA transposase of IS10.
  
     0.538
EEX38484.1
IS10-right transposase.
  
     0.534
EEX38449.1
Alpha-amylase precursor.
  
     0.530
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.