Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX37356.1Transport ATP-binding protein CydD. (595 aa)    
Predicted Functional Partners:
EEX37357.1
Transport ATP-binding protein CydC.
 
0.999
EEX36864.1
Cytochrome d ubiquinol oxidase subunit II.
 
  
 0.913
EEX36129.1
Cytochrome d ubiquinol oxidase subunit II.
 
  
 0.909
EEX36863.1
Cytochrome d ubiquinol oxidase subunit I.
 
  
 0.864
EEX36128.1
Cytochrome d ubiquinol oxidase subunit I.
 
  
 0.862
EEX37089.1
Cytochrome d ubiquinol oxidase subunit II.
  
  
 0.735
EEX37088.1
Cytochrome d ubiquinol oxidase subunit I.
  
  
 0.660
EEX37355.1
Thioredoxin reductase.
       0.568
EEX37358.1
Hypothetical protein.
 
     0.544
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
 
0.495
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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