Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lolAOuter membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (197 aa)    
Predicted Functional Partners:
lolB
Outer membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
 
 
 0.958
EEX36375.1
Outer membrane lipoprotein.
    
 
 0.924
EEX36830.1
Lipoprotein releasing system transmembrane protein LolC.
 
 
 
 0.866
EEX36832.1
Lipoprotein releasing system transmembrane protein LolE.
 
 
 
 0.851
EEX37380.1
ATPase AAA family.
  
    0.851
EEX35601.1
N-acetylmuramoyl-L-alanine amidase AmiB precursor.
  
 
   0.823
EEX37278.1
ABC-type antimicrobial peptide transport system permease component.
   
 
 0.809
EEX38467.1
ABC transporter ATP-binding protein.
   
 
 0.792
EEX38204.1
ABC-type antimicrobial peptide transport system ATPase component.
   
 
 0.792
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
   
 
 0.792
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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