STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37389.1Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily. (323 aa)    
Predicted Functional Partners:
EEX37390.1
Oligopeptide transport system permease protein OppC; TC 3.A.1.5.1.
 
 0.994
EEX37054.1
Putative transport system membrane protein.
 
 
 0.982
EEX37391.1
Oligopeptide transport system permease protein OppB; TC 3.A.1.5.1.
 
 0.982
EEX35836.1
Peptide ABC transporter permease component.
 
 0.970
EEX37392.1
ABC-type oligopeptide transport system component; COG4166.
 
 
 0.965
EEX37063.1
ABC-type dipeptide/oligopeptide/nickel transport system permease component.
 
 0.956
EEX36451.1
Peptide ABC transporter permease component.
 
 0.942
EEX38328.1
Peptide ABC transporter permease component.
 
 0.936
EEX37015.1
Peptide ABC transporter permease protein.
  
  0.932
EEX37388.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
  
 
0.922
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.