Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX37391.1Oligopeptide transport system permease protein OppB; TC 3.A.1.5.1. (306 aa)    
Predicted Functional Partners:
EEX37390.1
Oligopeptide transport system permease protein OppC; TC 3.A.1.5.1.
 0.999
EEX37392.1
ABC-type oligopeptide transport system component; COG4166.
 0.999
EEX37388.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 0.997
EEX37389.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 0.997
EEX36454.1
Oligopeptide/dipeptide ABC transporter ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.971
EEX36451.1
Peptide ABC transporter permease component.
 0.950
EEX36453.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.950
EEX38328.1
Peptide ABC transporter permease component.
 
 0.940
EEX37063.1
ABC-type dipeptide/oligopeptide/nickel transport system permease component.
 0.938
EEX35836.1
Peptide ABC transporter permease component.
 0.935
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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