STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37420.1Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
EEX37305.1
Transcriptional regulator of alpha-acetolactate operon AlsR; Belongs to the LysR transcriptional regulatory family.
  
     0.538
EEX37418.1
DNA-binding response regulator KdpE.
       0.520
EEX37419.1
Osmosensitive K+ channel histidine kinase KdpD.
       0.520
EEX37292.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.460
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.451
EEX37115.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.450
EEX37661.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.435
EEX37884.1
RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
    
 
 0.411
EEX36344.1
Transcriptional regulator LysR family.
  
     0.410
EEX37042.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.405
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.