STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37429.1N-acyl-D-amino-acid deacylase. (481 aa)    
Predicted Functional Partners:
EEX37428.1
Translation initiation inhibitor.
 
   
 0.851
EEX37427.1
Sodium-solute symporter putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.594
EEX38332.1
Beta-hexosaminidase.
 
  
  0.511
EEX37424.1
Beta-hexosaminidase.
 
  
  0.510
EEX37430.1
Transcriptional regulator.
 
     0.438
EEX36602.1
Beta-hexosaminidase.
    
  0.433
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.