STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37433.1Transcriptional regulator MarR family. (165 aa)    
Predicted Functional Partners:
EEX37432.1
Permease of the drug/metabolite transporter (DMT) superfamily.
 
   
 0.808
EEX38458.1
PTS system maltose and glucose-specific IIBC component.
     
 0.756
EEX37397.1
Phosphotransferase system sucrose-specific IIBC component.
     
 0.756
EEX37481.1
Phosphotransferase system glucose-specific IIBC component.
     
 0.756
EEX37577.1
Phosphotransferase system N-acetylglucosamine-specific IIBC component.
     
 0.756
EEX37624.1
Phosphotransferase system trehalose-specific IIBC component.
     
 0.756
EEX35752.1
PTS system alpha-glucoside-specific IIBC component.
     
 0.756
EEX35817.1
PTS system N-acetylmuramic acid-specific IIBC component.
     
 0.756
parC
Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
   
  
 0.477
EEX37935.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
  0.464
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.