Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX37260.1 | EEX37483.1 | VIB_001380 | VIB_001608 | Ribonucleotide reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | DNA polymerase III delta prime subunit. | 0.611 |
| EEX37260.1 | adk | VIB_001380 | VIB_001709 | Ribonucleotide reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.673 |
| EEX37260.1 | ndk | VIB_001380 | VIB_001856 | Ribonucleotide reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.824 |
| EEX37260.1 | tdk | VIB_001380 | VIB_001116 | Ribonucleotide reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Thymidine kinase. | 0.463 |
| EEX37260.1 | thyA | VIB_001380 | VIB_000227 | Ribonucleotide reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.871 |
| EEX37260.1 | tmk | VIB_001380 | VIB_001609 | Ribonucleotide reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.777 |
| EEX37482.1 | EEX37483.1 | VIB_001607 | VIB_001608 | Putative deoxyribonuclease YcfH. | DNA polymerase III delta prime subunit. | 0.846 |
| EEX37482.1 | EEX37486.1 | VIB_001607 | VIB_001611 | Putative deoxyribonuclease YcfH. | Aminodeoxychorismate lyase. | 0.800 |
| EEX37482.1 | mltG | VIB_001607 | VIB_001610 | Putative deoxyribonuclease YcfH. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.903 |
| EEX37482.1 | tmk | VIB_001607 | VIB_001609 | Putative deoxyribonuclease YcfH. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.814 |
| EEX37483.1 | EEX37260.1 | VIB_001608 | VIB_001380 | DNA polymerase III delta prime subunit. | Ribonucleotide reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.611 |
| EEX37483.1 | EEX37482.1 | VIB_001608 | VIB_001607 | DNA polymerase III delta prime subunit. | Putative deoxyribonuclease YcfH. | 0.846 |
| EEX37483.1 | EEX37486.1 | VIB_001608 | VIB_001611 | DNA polymerase III delta prime subunit. | Aminodeoxychorismate lyase. | 0.811 |
| EEX37483.1 | mltG | VIB_001608 | VIB_001610 | DNA polymerase III delta prime subunit. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.851 |
| EEX37483.1 | tdk | VIB_001608 | VIB_001116 | DNA polymerase III delta prime subunit. | Thymidine kinase. | 0.401 |
| EEX37483.1 | tmk | VIB_001608 | VIB_001609 | DNA polymerase III delta prime subunit. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.955 |
| EEX37486.1 | EEX37482.1 | VIB_001611 | VIB_001607 | Aminodeoxychorismate lyase. | Putative deoxyribonuclease YcfH. | 0.800 |
| EEX37486.1 | EEX37483.1 | VIB_001611 | VIB_001608 | Aminodeoxychorismate lyase. | DNA polymerase III delta prime subunit. | 0.811 |
| EEX37486.1 | mltG | VIB_001611 | VIB_001610 | Aminodeoxychorismate lyase. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.858 |
| EEX37486.1 | tmk | VIB_001611 | VIB_001609 | Aminodeoxychorismate lyase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.873 |
page 1 of 3