Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37499.1Hypothetical protein. (82 aa)    
Predicted Functional Partners:
EEX36987.1
Protein YciN.
  
     0.752
lapA
Membrane protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
     0.743
EEX37865.1
ABC-type uncharacterized transport system permease component.
  
    0.740
EEX38427.1
Hypothetical protein.
  
     0.737
EEX36550.1
Hypothetical protein; Belongs to the UPF0255 family.
  
   
 0.732
EEX36375.1
Outer membrane lipoprotein.
  
     0.716
EEX37653.1
Hypothetical protein; Belongs to the UPF0253 family.
  
     0.709
zapC
Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.690
EEX36001.1
Hypothetical protein.
  
     0.690
EEX36841.1
Hypothetical protein; Belongs to the UPF0304 family.
  
     0.684
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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