STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37503.1Putative lipoprotein. (473 aa)    
Predicted Functional Partners:
EEX37501.1
Hypothetical protein.
 
   
 0.929
EEX37504.1
HIT family hydrolase.
       0.842
EEX37502.1
Hypothetical protein.
     
 0.743
EEX37499.1
Hypothetical protein.
 
     0.674
EEX37500.1
Conserved hypothetical protein.
     
 0.655
EEX37505.1
Methyl-accepting chemotaxis protein; COG0840.
       0.631
EEX37506.1
Hypothetical protein.
       0.583
EEX37630.1
Zn-ribbon-containing, possibly nucleic-acid-binding protein.
  
     0.551
EEX36751.1
Hypothetical protein.
  
     0.499
EEX38228.1
LptA protein; Essential for LPS transport across the periplasm.
   
    0.439
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.