STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoEHeme O synthase protoheme IX farnesyltransferase COX10-CtaB; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (305 aa)    
Predicted Functional Partners:
EEX37513.1
Cytochrome O ubiquinol oxidase subunit III.
 
 
 0.998
EEX37512.1
Cytochrome O ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.997
EEX37514.1
Cytochrome O ubiquinol oxidase subunit IV.
 
 
 0.997
EEX37511.1
Cytochrome O ubiquinol oxidase subunit II.
 
 
 0.994
EEX37516.1
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC putative copper metallochaperone.
  
  
 0.900
EEX37517.1
Metal-binding protein.
  
    0.823
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.796
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
  
 0.748
hemH
Ferrochelatase protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.704
EEX37164.1
Iron-sulfur cluster-binding protein.
  
  
 0.576
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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