STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37579.1N-acetylglucosamine-6P-responsive transcriptional repressor NagC ROK family. (404 aa)    
Predicted Functional Partners:
EEX37577.1
Phosphotransferase system N-acetylglucosamine-specific IIBC component.
  
 0.970
EEX38458.1
PTS system maltose and glucose-specific IIBC component.
  
 0.933
EEX37397.1
Phosphotransferase system sucrose-specific IIBC component.
  
 0.933
EEX37481.1
Phosphotransferase system glucose-specific IIBC component.
  
 0.933
EEX37624.1
Phosphotransferase system trehalose-specific IIBC component.
  
 0.933
EEX35752.1
PTS system alpha-glucoside-specific IIBC component.
  
 0.933
EEX35817.1
PTS system N-acetylmuramic acid-specific IIBC component.
  
 0.933
EEX37578.1
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.919
EEX35717.1
Phosphotransferase system fructose-specific.
    
 0.846
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
  
 0.833
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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