Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37630.1Zn-ribbon-containing, possibly nucleic-acid-binding protein. (263 aa)    
Predicted Functional Partners:
EEX37153.1
Hypothetical protein.
  
     0.767
EEX37149.1
Type IIA topoisomerase B subunit.
  
     0.752
EEX37314.1
Hypothetical protein.
  
     0.740
EEX36751.1
Hypothetical protein.
  
     0.721
EEX37203.1
Hypothetical protein.
  
     0.684
EEX38045.1
General secretion pathway protein N.
  
     0.682
EEX38594.1
Hypothetical protein.
  
     0.660
EEX37997.1
MSHA biogenesis protein MshI.
  
     0.631
EEX36762.1
Hypothetical protein.
  
     0.612
EEX38201.1
Hypothetical protein.
  
     0.588
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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