Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEX37632.1Hypothetical protein. (755 aa)    
Predicted Functional Partners:
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
 0.841
queF
NADPH dependent preQ0 reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
       0.821
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
  
 0.787
EEX38405.1
BarA sensory histidine kinase.
  
 
 0.759
EEX37633.1
GGDEF domain family protein.
       0.704
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
  
 0.661
EEX37634.1
Decarboxylase family protein.
       0.615
EEX35660.1
Response regulator receiver modulated diguanylate cyclase.
  
 
 0.599
xni
Probable exodeoxyribonuclease IX; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.
       0.588
EEX38299.1
Hypothetical protein.
  
 0.586
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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