STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37633.1GGDEF domain family protein. (430 aa)    
Predicted Functional Partners:
EEX36951.1
Hypothetical protein.
 
 0.895
EEX36021.1
Predicted signal transduction protein.
 
 0.893
EEX38607.1
Sensory box/GGDEF family protein.
 
 0.881
EEX37815.1
Aerobic respiration control sensor protein ArcB.
 
 0.867
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
 
0.850
EEX37310.1
GGDEF family protein.
 
  0.848
EEX36183.1
Response regulator receiver modulated diguanylate phosphodiesterase.
 
 0.848
EEX37544.1
EAL domain protein.
 
 
  0.833
EEX37998.1
MSHA biogenesis protein MshH.
 
 
 0.831
EEX38405.1
BarA sensory histidine kinase.
 
 0.824
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.