STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37638.1Glycine cleavage system transcriptional activator GcvA; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
EEX37637.1
Alpha/beta hydrolase.
       0.800
EEX37299.1
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.629
EEX37745.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.616
EEX36344.1
Transcriptional regulator LysR family.
  
     0.602
fadR
Fatty acid metabolism regulator protein; Multifunctional regulator of fatty acid metabolism.
  
    0.563
EEX38132.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.550
EEX36816.1
Hypothetical protein; Belongs to the UPF0352 family.
  
     0.504
EEX36442.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.504
EEX38438.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.501
seqA
SeqA protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
  
     0.493
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.