STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37661.1Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (290 aa)    
Predicted Functional Partners:
EEX37299.1
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.715
EEX35712.1
Regulatory protein CysB; Belongs to the LysR transcriptional regulatory family.
  
     0.658
EEX38132.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.655
EEX36283.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.640
EEX37745.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.594
EEX37413.1
Trpba operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.567
EEX37662.1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
     0.565
EEX37781.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.558
tadA
tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.511
EEX36374.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.510
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.