STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37690.1C4-dicarboxylate-binding protein. (337 aa)    
Predicted Functional Partners:
EEX37689.1
TRAP dicarboxylate transporter DctM subunit.
 
 
 0.893
EEX35917.1
Tricarboxylate transport membrane protein tctA.
  
     0.712
EEX35950.1
Tricarboxylate transporter family protein.
  
     0.712
EEX35918.1
Putative tricarboxylic transport TctC.
  
     0.663
EEX36122.1
Transcriptional regulator KdgR KDG operon repressor.
 
     0.567
EEX37073.1
Signal transduction histidine kinase regulating citrate/malate metabolism.
 
  
 0.511
EEX35915.1
Sensor kinase CitA.
 
  
 0.472
EEX37974.1
TRAP-type uncharacterized transport system fused permease component.
  
   
 0.416
EEX37691.1
Hypothetical protein.
  
    0.406
EEX36844.1
Pyruvate formate-lyase.
   
  
 0.402
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.