STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37699.1Oligoendopeptidase F. (615 aa)    
Predicted Functional Partners:
EEX37315.1
Microbial collagenase secreted.
  
    0.688
EEX36156.1
Phospholipase/lecithinase/hemolysin.
  
     0.686
EEX36672.1
Flagellar motor switch protein FliM.
    
   0.608
EEX36458.1
Hypothetical protein.
  
     0.608
EEX38003.1
Lipid A core-O-antigen ligase.
  
     0.597
EEX36257.1
Hypothetical protein.
  
     0.553
EEX38271.1
Hypothetical protein.
  
     0.537
EEX37231.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
   
 0.517
EEX37768.1
Outer membrane protein OmpK.
  
     0.484
EEX37139.1
tPR domain protein putative component of TonB system.
 
     0.478
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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