STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37700.1Putative alkaline phosphatase. (557 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I type 1.
    
 0.709
EEX37893.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.670
EEX37907.1
Glycerophosphoryl diester phosphodiesterase.
 
 
 0.619
EEX38361.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
    
 0.574
EEX36187.1
Hypothetical Nudix-like regulator.
  
  
  0.574
EEX37908.1
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.571
EEX36747.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
     0.516
EEX37355.1
Thioredoxin reductase.
  
  
  0.492
EEX36156.1
Phospholipase/lecithinase/hemolysin.
  
  
  0.451
phnC
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 0.438
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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