STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37715.1Chitinase. (483 aa)    
Predicted Functional Partners:
EEX36215.1
Chitinase.
 
 
 0.925
EEX36059.1
Chitodextrinase precursor.
 
 
 0.913
EEX38331.1
Glucosamine-link cellobiase.
  
     0.770
EEX36281.1
Spindolin-related protein.
 
  
 0.731
EEX38145.1
Hypothetical protein.
  
     0.689
EEX36351.1
Predicted N-ribosylNicotinamide CRP-like regulator.
  
     0.655
EEX36602.1
Beta-hexosaminidase.
  
  
 0.647
EEX38326.1
(GlcNAc)2 ABC transporter: substrate-binding protein.
  
     0.625
EEX38271.1
Hypothetical protein.
  
     0.624
EEX37315.1
Microbial collagenase secreted.
 
 
 0.591
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.