STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37767.1Hypothetical protein; Similar to the N-terminal domain of Lon protease. (197 aa)    
Predicted Functional Partners:
EEX37765.1
Hypothetical protein.
 
   
 0.573
EEX35964.1
Exonuclease SbcC.
    
 0.543
EEX37766.1
RNA polymerase sigma-70 factor ECF subfamily.
     
 0.538
EEX38547.1
Sulfur carrier protein adenylyltransferase ThiF.
    
 0.516
EEX36033.1
Molybdopterin biosynthesis protein B.
    
 0.516
EEX36592.1
Hypothetical protein.
     
 0.512
sbcD
Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
    
 0.511
EEX35834.1
Hypothetical protein.
    
  0.485
EEX36197.1
Hypothetical protein.
     
 0.458
EEX35887.1
Cystathionine beta-synthase.
  
   0.455
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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