STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37784.1ribosomal-protein-S18p-alanine acetyltransferase. (366 aa)    
Predicted Functional Partners:
EEX37785.1
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); COG0189.
     0.914
argH
Argininosuccinate lyase; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
    
 0.798
argA
Acetylglutamate kinase; COG0548.
    
 0.791
EEX37268.1
Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase.
  
 
 0.772
EEX38529.1
Hypothetical protein.
   
   0.761
EEX36517.1
Hypothetical protein.
   
   0.761
EEX36321.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
    
   0.672
EEX37786.1
Mg2+ and Co2+ transporter.
 
     0.545
EEX37010.1
DNA-binding protein inhibitor Id-2-related protein.
  
     0.536
EEX37541.1
Predicted amidohydrolase.
 
 
 0.484
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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