Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37787.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
EEX37786.1
Mg2+ and Co2+ transporter.
       0.759
EEX37788.1
Chromate transport protein ChrA.
       0.664
EEX37785.1
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); COG0189.
    
 0.657
EEX36202.1
Hypothetical protein.
  
     0.643
EEX37141.1
Hypothetical protein.
  
     0.533
EEX36009.1
Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
  0.510
EEX37327.1
Hypothetical protein.
  
     0.482
EEX36873.1
Hypothetical protein; Belongs to the UPF0149 family.
  
     0.468
EEX36584.1
Autoinducer 1 sensor kinase/phosphatase luxN.
  
     0.465
EEX37080.1
Alpha-1,6-galactosidase putative.
  
     0.464
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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