Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37794.1Smp-like protein. (203 aa)    
Predicted Functional Partners:
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
  
  0.850
EEX38405.1
BarA sensory histidine kinase.
  
  
  0.822
EEX35963.1
Sensor histidine kinase CqsS.
  
  
  0.810
EEX36584.1
Autoinducer 1 sensor kinase/phosphatase luxN.
  
  
  0.785
EEX38033.1
Hypothetical protein.
  
     0.773
EEX36943.1
DNA transformation protein TfoX.
  
     0.770
bamC
NlpB lipoprotein component of the protein assembly complex; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.769
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
     0.769
EEX38317.1
Outer membrane protein OmpU.
  
     0.767
EEX38615.1
Hypothetical protein.
  
     0.765
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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