STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37794.1Smp-like protein. (203 aa)    
Predicted Functional Partners:
EEX35963.1
Sensor histidine kinase CqsS.
  
  
  0.886
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
  
  0.859
EEX38405.1
BarA sensory histidine kinase.
  
  
  0.833
EEX36584.1
Autoinducer 1 sensor kinase/phosphatase luxN.
  
  
  0.795
EEX36073.1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
  
  0.779
EEX38033.1
Hypothetical protein.
  
     0.773
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.770
EEX36943.1
DNA transformation protein TfoX.
  
     0.770
bamC
NlpB lipoprotein component of the protein assembly complex; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.769
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
     0.769
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.