Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX36206.1 | EEX36461.1 | VIB_002521 | VIB_002776 | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.614 |
| EEX36206.1 | EEX37068.1 | VIB_002521 | VIB_001182 | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | 0.668 |
| EEX36206.1 | secA | VIB_002521 | VIB_001958 | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.886 |
| EEX36461.1 | EEX36206.1 | VIB_002776 | VIB_002521 | Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | 0.614 |
| EEX36461.1 | EEX37068.1 | VIB_002776 | VIB_001182 | Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | 0.614 |
| EEX36461.1 | rplV | VIB_002776 | VIB_000543 | Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.902 |
| EEX36461.1 | secA | VIB_002776 | VIB_001958 | Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.937 |
| EEX36461.1 | secY | VIB_002776 | VIB_000558 | Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Preprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.781 |
| EEX37068.1 | EEX36206.1 | VIB_001182 | VIB_002521 | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | 0.668 |
| EEX37068.1 | EEX36461.1 | VIB_001182 | VIB_002776 | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | Outer membrane protein A precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.614 |
| EEX37068.1 | secA | VIB_001182 | VIB_001958 | Maltoporin; Maltose/maltodextrin high-affinity receptor, phage lambda receptor protein. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.886 |
| EEX37728.1 | rplV | VIB_001854 | VIB_000543 | Hypothetical protein. | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.876 |
| EEX37728.1 | secA | VIB_001854 | VIB_001958 | Hypothetical protein. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.881 |
| EEX38310.1 | rplV | VIB_000255 | VIB_000543 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.824 |
| EEX38310.1 | secA | VIB_000255 | VIB_001958 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.971 |
| EEX38310.1 | secB | VIB_000255 | VIB_000492 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Chaperone protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.712 |
| EEX38310.1 | secE | VIB_000255 | VIB_003102 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. | 0.990 |
| EEX38310.1 | secY | VIB_000255 | VIB_000558 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.978 |
| acpP | rplV | VIB_001613 | VIB_000543 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.891 |
| acpP | secA | VIB_001613 | VIB_001958 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.881 |
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