Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX37848.1Endonuclease; Belongs to the UPF0102 family. (107 aa)    
Predicted Functional Partners:
gmhA-2
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
  
    0.865
EEX37850.1
Hemolysin precursor.
       0.842
lpoA
LppC putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.
  
  
 0.813
EEX38049.1
Predicted amidophosphoribosyltransferase.
 
    0.726
EEX35676.1
Predicted ATPase with chaperone activity; COG0606.
 
  
 0.721
rsmI
Tetrapyrrole (Corrin-Porphyrin) methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.711
EEX35664.1
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
 
  
 0.636
EEX36021.1
Predicted signal transduction protein.
   
    0.457
EEX38607.1
Sensory box/GGDEF family protein.
   
    0.448
EEX37310.1
GGDEF family protein.
   
    0.448
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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