Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX35614.1 | EEX37884.1 | VIB_003093 | VIB_002016 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.900 |
| EEX35614.1 | rpoA | VIB_003093 | VIB_000563 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.529 |
| EEX35614.1 | rpoC | VIB_003093 | VIB_003094 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.583 |
| EEX35614.1 | rpoZ | VIB_003093 | VIB_000435 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.529 |
| EEX36551.1 | EEX37884.1 | VIB_000651 | VIB_002016 | Transcriptional regulator Crl. | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.729 |
| EEX36641.1 | EEX37884.1 | VIB_000746 | VIB_002016 | Arsenate reductase. | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.690 |
| EEX36641.1 | rpoA | VIB_000746 | VIB_000563 | Arsenate reductase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.862 |
| EEX36641.1 | rpoC | VIB_000746 | VIB_003094 | Arsenate reductase. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.844 |
| EEX36641.1 | rpoZ | VIB_000746 | VIB_000435 | Arsenate reductase. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.692 |
| EEX37884.1 | EEX35614.1 | VIB_002016 | VIB_003093 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | 0.900 |
| EEX37884.1 | EEX36551.1 | VIB_002016 | VIB_000651 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator Crl. | 0.729 |
| EEX37884.1 | EEX36641.1 | VIB_002016 | VIB_000746 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Arsenate reductase. | 0.690 |
| EEX37884.1 | EEX37885.1 | VIB_002016 | VIB_002017 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Lipoprotein NlpD. | 0.752 |
| EEX37884.1 | EEX38226.1 | VIB_002016 | VIB_000600 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.700 |
| EEX37884.1 | dnaG | VIB_002016 | VIB_002030 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.760 |
| EEX37884.1 | nusA | VIB_002016 | VIB_000253 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.738 |
| EEX37884.1 | rpoA | VIB_002016 | VIB_000563 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.938 |
| EEX37884.1 | rpoC | VIB_002016 | VIB_003094 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
| EEX37884.1 | rpoZ | VIB_002016 | VIB_000435 | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.904 |
| EEX37885.1 | EEX37884.1 | VIB_002017 | VIB_002016 | Lipoprotein NlpD. | RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.752 |
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