Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37912.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
EEX37913.1
Hypothetical protein.
 
     0.953
EEX37915.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
     0.895
EEX37914.1
hsdS type I site-specific deoxyribonuclease.
 
    0.881
EEX38145.1
Hypothetical protein.
  
     0.747
EEX36342.1
PvcB protein.
  
     0.679
EEX37686.1
Hypothetical protein.
  
     0.613
EEX37984.1
MSHA biogenesis protein MshQ.
  
     0.573
EEX37282.1
Lipase precursor.
  
     0.454
EEX37715.1
Chitinase.
  
     0.445
EEX35722.1
Transcriptional activator of cad operon.
  
     0.438
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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