STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37914.1hsdS type I site-specific deoxyribonuclease. (585 aa)    
Predicted Functional Partners:
EEX37915.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
 
 0.998
EEX38525.1
Type I restriction-modification system M subunit.
 
 
 0.986
EEX38491.1
Hypothetical protein.
 
 
 0.937
EEX37913.1
Hypothetical protein.
 
     0.894
EEX38523.1
Type I site-specific deoxyribonuclease HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.891
EEX37912.1
Hypothetical protein.
 
     0.878
EEX35881.1
Predicted ATP-dependent endonuclease of the OLD family.
  
  
 0.712
EEX36507.1
Hypothetical protein.
  
    0.623
atpF
ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.602
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.548
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.