STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37943.1Twitching motility protein PilT. (345 aa)    
Predicted Functional Partners:
EEX38382.1
Leader peptidase (Prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.858
EEX37942.1
Type IV pilus (Tfp) assembly protein ATPase component PilU.
 
  
0.825
EEX38381.1
Type 4 fimbrial assembly protein PilC.
 
  
 0.807
EEX37990.1
MSHA biogenesis protein MshG.
 
  
 0.806
EEX38134.1
Hypothetical protein.
 
   
 0.802
EEX38040.1
General secretion pathway protein F.
 
  
 0.796
EEX38137.1
Type IV pilus biogenesis protein PilQ.
 
   
 0.703
EEX38379.1
Type IV pilin PilA; Belongs to the N-Me-Phe pilin family.
 
   
 0.653
EEX37944.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.618
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.578
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.