Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX35652.1 | EEX36850.1 | VIB_003021 | VIB_000957 | DNA polymerase III beta subunit. | Exodeoxyribonuclease III. | 0.929 |
| EEX35652.1 | EEX37952.1 | VIB_003021 | VIB_002084 | DNA polymerase III beta subunit. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.748 |
| EEX36850.1 | EEX35652.1 | VIB_000957 | VIB_003021 | Exodeoxyribonuclease III. | DNA polymerase III beta subunit. | 0.929 |
| EEX36850.1 | EEX37952.1 | VIB_000957 | VIB_002084 | Exodeoxyribonuclease III. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.892 |
| EEX36850.1 | birA | VIB_000957 | VIB_003105 | Exodeoxyribonuclease III. | Biotin-protein ligase/biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.887 |
| EEX36850.1 | nth | VIB_000957 | VIB_001689 | Exodeoxyribonuclease III. | Predicted EndoIII-related endonuclease; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.970 |
| EEX37952.1 | EEX35652.1 | VIB_002084 | VIB_003021 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III beta subunit. | 0.748 |
| EEX37952.1 | EEX36850.1 | VIB_002084 | VIB_000957 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease III. | 0.892 |
| EEX37952.1 | EEX37953.1 | VIB_002084 | VIB_002085 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.755 |
| EEX37952.1 | EEX37954.1 | VIB_002084 | VIB_002086 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Membrane-bound lytic murein transglycosylase C precursor; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.556 |
| EEX37952.1 | birA | VIB_002084 | VIB_003105 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Biotin-protein ligase/biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.553 |
| EEX37952.1 | msrA-2 | VIB_002084 | VIB_002343 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.474 |
| EEX37952.1 | nth | VIB_002084 | VIB_001689 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Predicted EndoIII-related endonuclease; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.748 |
| EEX37952.1 | ruvB | VIB_002084 | VIB_000969 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.453 |
| EEX37952.1 | trmB | VIB_002084 | VIB_002083 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | tRNA(m7G46)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.564 |
| EEX37952.1 | trpC | VIB_002084 | VIB_001485 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Belongs to the TrpC family. | 0.454 |
| EEX37953.1 | EEX37952.1 | VIB_002085 | VIB_002084 | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.755 |
| EEX37953.1 | EEX37954.1 | VIB_002085 | VIB_002086 | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Membrane-bound lytic murein transglycosylase C precursor; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.612 |
| EEX37953.1 | trmB | VIB_002085 | VIB_002083 | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | tRNA(m7G46)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.518 |
| EEX37954.1 | EEX37952.1 | VIB_002086 | VIB_002084 | Membrane-bound lytic murein transglycosylase C precursor; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.556 |
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