STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37976.1Beta-galactosidase/beta-glucuronidase. (265 aa)    
Predicted Functional Partners:
EEX35968.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.687
EEX35983.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.580
EEX37399.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.575
rraB
Hypothetical protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.
       0.552
EEX36730.1
Oxidoreductase short-chain dehydrogenase/reductase family.
  
 
 0.537
EEX37302.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
 0.537
EEX37473.1
Oxidoreductase short-chain dehydrogenase/reductase family.
  
 
 0.537
EEX37489.1
3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.537
EEX37687.1
acetoacetyl-CoA reductase.
  
 
 0.537
EEX36123.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
 
 0.537
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.