STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37976.1Beta-galactosidase/beta-glucuronidase. (265 aa)    
Predicted Functional Partners:
rraB
Hypothetical protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.
       0.711
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.617
EEX38332.1
Beta-hexosaminidase.
  
 0.488
EEX36602.1
Beta-hexosaminidase.
  
 0.488
EEX37424.1
Beta-hexosaminidase.
  
 0.488
EEX35983.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.481
EEX37399.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.468
EEX37315.1
Microbial collagenase secreted.
  
    0.428
EEX36059.1
Chitodextrinase precursor.
     
 0.425
EEX36215.1
Chitinase.
     
 0.425
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.