Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX36005.1 | EEX37980.1 | VIB_002318 | VIB_002114 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Cytoplasmic axial filament protein CafA and Ribonuclease G. | 0.509 |
EEX36005.1 | eno | VIB_002318 | VIB_000346 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.468 |
EEX36005.1 | pnp | VIB_002318 | VIB_000248 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.779 |
EEX37668.1 | EEX37980.1 | VIB_001793 | VIB_002114 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Cytoplasmic axial filament protein CafA and Ribonuclease G. | 0.509 |
EEX37668.1 | eno | VIB_001793 | VIB_000346 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.468 |
EEX37668.1 | pnp | VIB_001793 | VIB_000248 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.779 |
EEX37978.1 | EEX37979.1 | VIB_002112 | VIB_002113 | Predicted amidohydrolase. | Possible exported protein. | 0.772 |
EEX37978.1 | EEX37980.1 | VIB_002112 | VIB_002114 | Predicted amidohydrolase. | Cytoplasmic axial filament protein CafA and Ribonuclease G. | 0.758 |
EEX37978.1 | EEX37981.1 | VIB_002112 | VIB_002115 | Predicted amidohydrolase. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.707 |
EEX37979.1 | EEX37978.1 | VIB_002113 | VIB_002112 | Possible exported protein. | Predicted amidohydrolase. | 0.772 |
EEX37979.1 | EEX37980.1 | VIB_002113 | VIB_002114 | Possible exported protein. | Cytoplasmic axial filament protein CafA and Ribonuclease G. | 0.785 |
EEX37979.1 | EEX37981.1 | VIB_002113 | VIB_002115 | Possible exported protein. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.731 |
EEX37980.1 | EEX36005.1 | VIB_002114 | VIB_002318 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.509 |
EEX37980.1 | EEX37668.1 | VIB_002114 | VIB_001793 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.509 |
EEX37980.1 | EEX37978.1 | VIB_002114 | VIB_002112 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | Predicted amidohydrolase. | 0.758 |
EEX37980.1 | EEX37979.1 | VIB_002114 | VIB_002113 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | Possible exported protein. | 0.785 |
EEX37980.1 | EEX37981.1 | VIB_002114 | VIB_002115 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.853 |
EEX37980.1 | EEX38196.1 | VIB_002114 | VIB_000569 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.509 |
EEX37980.1 | EEX38223.1 | VIB_002114 | VIB_000597 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | Hypothetical protein; Displays ATPase and GTPase activities. | 0.886 |
EEX37980.1 | eno | VIB_002114 | VIB_000346 | Cytoplasmic axial filament protein CafA and Ribonuclease G. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.882 |
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