Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX37984.1MSHA biogenesis protein MshQ. (1479 aa)    
Predicted Functional Partners:
EEX36157.1
Regulatory P domain of the subtilisin-like proprotein convertase.
  
 0.970
EEX37405.1
Alkaline serine protease.
 
 0.832
EEX36868.1
TolA protein.
  
 
 0.830
EEX37994.1
Type II secretory pathway component PulD; COG1450.
 
  
 0.817
EEX37519.1
Cell division protein FtsK.
    
 
 0.812
EEX37985.1
MshO.
 
   
 0.804
EEX37996.1
MSHA biogenesis protein MshJ.
 
   
 0.800
EEX36059.1
Chitodextrinase precursor.
 
 
 0.763
EEX37988.1
MSHA pilin protein MshA.
 
   
 0.756
EEX36215.1
Chitinase.
 
 
 0.755
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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