STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37988.1MSHA pilin protein MshA. (155 aa)    
Predicted Functional Partners:
EEX37991.1
MSHA biogenesis protein MshE.
 
 0.987
EEX37986.1
MSHA pilin protein MshD.
 
   
 0.935
EEX37994.1
Type II secretory pathway component PulD; COG1450.
 
 
 0.929
EEX37990.1
MSHA biogenesis protein MshG.
 
  
 0.925
EEX37992.1
MSHA biogenesis protein MshN.
 
     0.902
EEX37985.1
MshO.
 
   
 0.899
EEX37989.1
MSHA pilin protein MshB.
 
  
 
0.891
EEX37996.1
MSHA biogenesis protein MshJ.
 
   
 0.883
EEX38380.1
Type 4 fimbrial assembly ATPase PilB.
  
 0.859
EEX38039.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 0.859
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.