Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EEX37989.1MSHA pilin protein MshB. (208 aa)    
Predicted Functional Partners:
EEX37991.1
MSHA biogenesis protein MshE.
 
 0.987
EEX37994.1
Type II secretory pathway component PulD; COG1450.
 
 
 0.933
EEX37986.1
MSHA pilin protein MshD.
 
     0.920
EEX37990.1
MSHA biogenesis protein MshG.
 
  
 0.919
EEX37992.1
MSHA biogenesis protein MshN.
 
     0.908
EEX37988.1
MSHA pilin protein MshA.
 
  
 
0.891
EEX37996.1
MSHA biogenesis protein MshJ.
 
   
 0.880
EEX37985.1
MshO.
 
     0.878
EEX38380.1
Type 4 fimbrial assembly ATPase PilB.
  
 0.859
EEX38039.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 0.859
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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