STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37994.1Type II secretory pathway component PulD; COG1450. (536 aa)    
Predicted Functional Partners:
EEX38037.1
General secretion pathway protein C.
 
 
 0.952
EEX37992.1
MSHA biogenesis protein MshN.
 
 
 0.901
EEX37989.1
MSHA pilin protein MshB.
 
  
 0.885
EEX37990.1
MSHA biogenesis protein MshG.
 
  
 0.879
EEX37991.1
MSHA biogenesis protein MshE.
 
  
 0.876
EEX37988.1
MSHA pilin protein MshA.
 
  
 0.865
EEX37993.1
Type II secretory pathway component ExeA (predicted ATPase); COG3267.
 
  
 0.859
EEX37372.1
Hypothetical protein.
    
   0.851
EEX37985.1
MshO.
 
  
 0.848
EEX37986.1
MSHA pilin protein MshD.
 
  
 0.837
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.