STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37998.1MSHA biogenesis protein MshH. (663 aa)    
Predicted Functional Partners:
EEX36021.1
Predicted signal transduction protein.
 
 0.990
EEX37815.1
Aerobic respiration control sensor protein ArcB.
 
 0.988
EEX38405.1
BarA sensory histidine kinase.
 
 
 0.986
EEX35660.1
Response regulator receiver modulated diguanylate cyclase.
 
 0.985
EEX37310.1
GGDEF family protein.
 
 
 0.981
EEX38295.1
C-di-GMP phosphodiesterase A-related protein.
 
0.977
EEX37925.1
Sensory box/GGDEF family protein.
 
 0.975
EEX36057.1
Sensory box/GGDEF family protein.
 
 0.975
EEX38299.1
Hypothetical protein.
 
0.969
EEX36381.1
GGDEF family protein.
 
 0.960
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.